Table 1: Chromosomal aberration in hepatocellular carcinoma.

Chromosome Candidate target gene and their location Aberration type Reference
1q CSK1B(1q21.2) Gain [88, 89]
CHD1L(1q21.1)
JTB(1q21)
MDM4(1q32.1)
1p p18(1p32) Loss [90-92]
p73(1p36.3)
RIZ(1p36.13-p36.23)
3q Gankyrin (3q28) Gain [33]
3p ROSSF1A(3p21.3) Loss of heterogeneity, CpG methylation [93, 94]
CTNNB1(3p21)
TGF-1βR11(3q22)
4q Loss of heterogeneity [95]
6p Gain [96]
6q M6P/IGF2R (6q26-q27) Loss of heterogeneity [97]
8q c-Myc (8q24.21) Gain [98.99,100]
PTK2 (8q24.3)
EIF3S3 (8q23.3)
SGK3 (8q13.1)
8p DLC-1 (8p21.3-22) Loss of heterogeneity, CpG methylation [101]
LPTS (8p23)
CSMD1 (8p23.2)
9p CDKN2A (9p21) Loss of heterogeneity, CpG methylation [102]
CDKN2B (9q21)
11q cyclinD1 (11q13) Gain [103]
10q PTEN/MMAC1 (10q23.3) Loss of heterogeneity [104]
11p KAI1 (11p11.2) Loss of heterogeneity, CpG methylation [105]
IGF-2 (11p15)
TSLC1 (11p23.2)
13q Rb1 (13q14.2) Loss of heterogeneity [106, 107]
BRCA2 (13q12.3)
Tg737 (13q12.1)
TFDP1 (13q34)
CUL4A (13q34)
CDC1 (13q34)
16q CDH1 (16q22.1) Loss of heterogeneity, CpG methylation [102]
16p Axin1 (16p13.3) CpG methylation [108]
SOCS-1 (16p13.3)
17p p53 (17p13.1) Loss of heterogeneity [103, 109]
HIC-1 (17p13.3)
HCCS1 (17p13.3)