Category 1 — Intensity measurements |
Nuc/Cell Intensity |
Intensity from nuclear region / intensity
from cytoplasmic region |
Cell/Bckg Intensity |
Intensity from cytoplasmic region /
background intensity |
Nuc Intensity |
Intensity from nuclear region per unit
area |
Cell Intensity |
Cytoplasmic intensity per unit area |
Background Intensity |
Average intensity in the local background |
Light Flux |
Total intensity in per nuclear region /
cytoplasmic intensity per unit area |
Intensity (N+C) |
Intensity in whole cell per unit area |
IxA (Nuc) |
Total nuclear intensity per cell |
IxA (Cell) |
Total cytoplasmic intensity per cell |
IxA (N+C) |
Total intensity from whole cell per cell |
Organelle Inclusion/Cell Intensity |
Ratio of the organelle intensity
inclusions to cell intensity |
Organelle Inclusion/Bckg |
Intensity of organelle objects / local
background intensity |
Organelle Intensity |
Intensity of pixels within inclusions per
unit area |
OrgIxA |
Total organelle intensity per cell |
Category 2 — Measurements of intensity
distribution |
Nuc Intensity CV |
Coefficient of variation for intensity in
the nuclear region |
Intensity Spreading |
Cellular intensity distribution |
Cell Intensity CV |
Coefficient of variation of
cell intensity |
Category 3 —Morphological measurements |
Cell Area |
Cell area |
Nuc/Cell Area |
Nuclear area / cell area |
Cell Gyration Radius |
Average radius of cells |
Cell Elongation Mean |
Ratio of the short axis to long axis of
the cell |
Cell 1/(Form Factor) |
Cell roundness index |
Organelle Count |
Number of identified organelle objects |
Organelle Spacing |
Distance between organelle objects |
Organelle Neighbor Count |
Number of neighboring organelle |
Organelle Mean Area |
Mean area of identified organelle objects |
Organelle 1/(Form Factor) |
Roundness index of organelle |
Organelle Elongation |
Mean ratio of the short axis of the
organelle to the long axis |
Organelle Distance to Nuc |
Distance from the center of gravity of
organelle to center of gravity of nucleus |
Organelle Total Area |
Total area of organelle |
Cell Count |
Number of cells |