Table 2: Results of the haplotype analysis using 2- or 3-markers sliding window in markers of DCDC2 gene.

Haplotypes Frequency Global
p-values
Individual haplotype test Adjusted p-value permutation
(1000)
OR
(95% CI)
p-values
Sliding window
2-markers
rs10498720-rs6940827 G-C 0.188 0.0185 1 0.0997 0.2068
T-C 0.632 1.321 (0.8461 – 2.061) 0.5408
T-T 0.180 2.281 (1.255 – 4.148) 0.0116
rs2996452-rs1318700 C-A 0.475 0.0276 1 0.0036
C-T 0.137 0.4724 (0.2589 – 0.873) 0.0953
T-A 0.371 0.5834 (0.3804 – 0.8947) 0.0922
T-T 0.016 0.8063 (0.1407 – 4.62) 0.7442
3-markers
rs6940827-rs1277351-rs9379655 C-A-G 0.401 0.0251 1 0.6823 0.3227
C-A-T 0.029 0.5245 (0.1537 – 1.789) 0.2484
C-G-T 0.387 0.8443 (0.5539 – 1.287) 0.1061
T-A-G 0.013 5.175 (0.6055 - 44.22) 0.0745
T-A-T 0.126 1.448 (0.8191 – 7.722) 0.1797
T-G-T 0.040 2.675 (0.9268 – 7.722) 0.0435
4-markers
rs10498720-rs6940827-rs1277351-rs9379655 T-C-A-G 0.398 0.03576 1 0.7079 0.1199
T-C-G-T 0.216 1.01 (0.624 - 1.634) 0.9921
G-C-C-T 0.173 0.7118 (0.4216 - 1.202) 0.0624
T-T-A-T 0.126 1.473 (0.8322 - 2.607) 0.181
T-T-G-T 0.038 2.466 (0.848 - 7.172) 0.0591
T-C-A-T 0.020 0.3875 (0.07633 - 1.967) 0.1575
T-T-A-G 0.015 6.143 (0.7291 - 51.76) 0.0537
rs6940827-rs1277351-rs9379655-rs7770684 C-A-G-C 0.405 0.0089 1 0.6203
C-G-T-C 0.379 0.869 (0.5665 - 1.333) 0.2601
T-A-T-T 0.117 1.285 (0.7124 - 2.319) 0.3257
T-G-T-C 0.040 2.385 (0.8213 - 6.926) 0.0659
C-A-T-T 0.024 0.2622 (0.0547 - 1.258) 0.0572
rs793862-rs793861-rs793850-rs1343624 T-T-C-T 0.390 0.0383 1 0.7545
C-A-T-C 0.357 0.837 (0.5238 - 1.337) 0.4057
C-A-C-C 0.155 1.032 (0.5591 - 1.905) 0.4148
T-T-C-C 0.059 1.206 (0.5169 - 2.813) 0.5226