Haplotypes | Frequency |
Global p-values |
Individual haplotype test |
Adjusted p-value permutation (1000) |
||
---|---|---|---|---|---|---|
OR (95% CI) |
p-values | |||||
Sliding window | ||||||
2-markers | ||||||
rs10498720-rs6940827 | G-C | 0.188 | 0.0185 | 1 | 0.0997 | 0.2068 |
T-C | 0.632 | 1.321 (0.8461 – 2.061) | 0.5408 | |||
T-T | 0.180 | 2.281 (1.255 – 4.148) | 0.0116 | |||
rs2996452-rs1318700 | C-A | 0.475 | 0.0276 | 1 | 0.0036 | |
C-T | 0.137 | 0.4724 (0.2589 – 0.873) | 0.0953 | |||
T-A | 0.371 | 0.5834 (0.3804 – 0.8947) | 0.0922 | |||
T-T | 0.016 | 0.8063 (0.1407 – 4.62) | 0.7442 | |||
3-markers | ||||||
rs6940827-rs1277351-rs9379655 | C-A-G | 0.401 | 0.0251 | 1 | 0.6823 | 0.3227 |
C-A-T | 0.029 | 0.5245 (0.1537 – 1.789) | 0.2484 | |||
C-G-T | 0.387 | 0.8443 (0.5539 – 1.287) | 0.1061 | |||
T-A-G | 0.013 | 5.175 (0.6055 - 44.22) | 0.0745 | |||
T-A-T | 0.126 | 1.448 (0.8191 – 7.722) | 0.1797 | |||
T-G-T | 0.040 | 2.675 (0.9268 – 7.722) | 0.0435 | |||
4-markers | ||||||
rs10498720-rs6940827-rs1277351-rs9379655 | T-C-A-G | 0.398 | 0.03576 | 1 | 0.7079 | 0.1199 |
T-C-G-T | 0.216 | 1.01 (0.624 - 1.634) | 0.9921 | |||
G-C-C-T | 0.173 | 0.7118 (0.4216 - 1.202) | 0.0624 | |||
T-T-A-T | 0.126 | 1.473 (0.8322 - 2.607) | 0.181 | |||
T-T-G-T | 0.038 | 2.466 (0.848 - 7.172) | 0.0591 | |||
T-C-A-T | 0.020 | 0.3875 (0.07633 - 1.967) | 0.1575 | |||
T-T-A-G | 0.015 | 6.143 (0.7291 - 51.76) | 0.0537 | |||
rs6940827-rs1277351-rs9379655-rs7770684 | C-A-G-C | 0.405 | 0.0089 | 1 | 0.6203 | |
C-G-T-C | 0.379 | 0.869 (0.5665 - 1.333) | 0.2601 | |||
T-A-T-T | 0.117 | 1.285 (0.7124 - 2.319) | 0.3257 | |||
T-G-T-C | 0.040 | 2.385 (0.8213 - 6.926) | 0.0659 | |||
C-A-T-T | 0.024 | 0.2622 (0.0547 - 1.258) | 0.0572 | |||
rs793862-rs793861-rs793850-rs1343624 | T-T-C-T | 0.390 | 0.0383 | 1 | 0.7545 | |
C-A-T-C | 0.357 | 0.837 (0.5238 - 1.337) | 0.4057 | |||
C-A-C-C | 0.155 | 1.032 (0.5591 - 1.905) | 0.4148 | |||
T-T-C-C | 0.059 | 1.206 (0.5169 - 2.813) | 0.5226 |