Table 2: DAMD primers tested in the current study in terms of primer name, primer sequence and temperature annealing (°C).
Primer Number |
Primer Name |
Primer Sequence 5'-3' |
Source Species |
Ta (°C) |
References |
1 |
URP1F |
ATCCAAGGTCCGAGACAACC |
Rice |
55 |
[16] |
2 |
URP2R |
CCCAGCAACTGATCGCACAC |
Rice |
61 |
[16] |
3 |
URP4R |
AGGACTCGATAACAGGCTCC |
Rice |
58 |
[16] |
4 |
URP9F |
ATGTGTGCGATCAGTTGCTG |
Rice |
60 |
[16] |
5 |
URP25F |
GATGTGTTCTTGGAGCCTGT |
Rice |
58 |
[16] |
6 |
HVR(-) |
CCTCCTCCCTCCT |
Rice |
50 |
[16] |
7 |
OGRB01 |
AGGGCTGGAGGAGGGC |
Rice |
55 |
[16] |
8 |
FVIIex8C |
CCTGTGTGTGTGCAT |
Human |
47 |
[16] |
9 |
HBV3 |
GGTGAAGCACAGGTG |
Human |
53 |
[16] |
10 |
HBV5 |
GGTGTAGAGAGGGGT |
Human |
56 |
[16] |
11 |
YNZ22 |
CTCTGGGTGTGGTGC |
Human |
56 |
[16] |
12 |
14C2 |
GGCAGGATTGAAGC |
Human |
53 |
[16] |
13 |
33.6 |
GGAGGTGGGCA |
Human |
52 |
[16] |
14 |
6.2H(+) |
AGGAGGAGGGGAAGG |
Human |
56 |
[16] |
15 |
M13 |
GAGGGTGGCGGCTCT |
Phage M13 |
57 |
[16] |
16 |
HBVb |
GGTGTAGAGAGAGGGGT |
Rice |
52 |
[9] |
17 |
HVRc |
CCTCCTCCCTCCT |
Rice |
52 |
[9] |
18 |
URP2F |
GTGTGCGATCAGTTGCTGGG |
Rice |
50 |
[17] |
19 |
URP6R |
GGCAAGCTGGTGGGAGGTAC |
Rice |
50 |
[17] |
20 |
URP13R |
TACATCGCAAGTGACACAGG |
Rice |
50 |
[17] |
21 |
URP17R |
AATGTGGGCAAGCTGGTGGT |
Rice |
50 |
[17] |
22 |
M13 |
GAGGGTGGCGGTTCCT |
Rice |
55 |
[14] |
23 |
HVA |
AGGATGGAAAGGAGGC |
Rice |
55 |
[14] |
24 |
HVY |
GCCTTTCCCGAG |
Rice |
55 |
[14] |