Table 3: Sensitivity (fraction of correct predictions of pro-tected residues) and specificity (fraction of correct predictions of unprotected residues) characteristics of predictions made by the Fold/Unfold method with different sizes of sliding window and the CamP method
| PDB |
11 |
9 |
| Sensitivity |
Specificity |
Sensitivity |
Specificity |
| 1hml |
0.98 |
0.19 |
0.91 |
0.28 |
| 1hrc |
0.79 |
0.68 |
0.68 |
0.65 |
| 2ci2 |
0.76 |
0.23 |
0.62 |
0.23 |
| 2eql |
0.74 |
0.46 |
0.77 |
0.51 |
| 2rn2 |
0.85 |
0.24 |
0.88 |
0.29 |
| 2sns |
0.66 |
0.53 |
0.62 |
0.57 |
| 6pti |
0.81 |
0.36 |
0.87 |
0.40 |
| average |
0.80 |
0.38 |
0.76 |
0.42 |
| PDB |
7 |
CamP |
| Sensitivity |
Specificity |
Sensitivity |
Specificity |
| 1hml |
0.93 |
0.32 |
1.00 |
0.08 |
| 1hrc |
0.74 |
0.61 |
1.00 |
0.06 |
| 2ci2 |
0.68 |
0.23 |
0.91 |
0.27 |
| 2eql |
0.70 |
0.53 |
0.99 |
0.08 |
| 2rn2 |
0.80 |
0.34 |
0.98 |
0.09 |
| 2sns |
0.55 |
0.59 |
1.00 |
0.01 |
| 6pti |
0.71 |
0.56 |
0.94 |
0.32 |
| average |
0.73 |
0.45 |
0.97 |
0.13 |