Table 1: List of residues involved in catalysis and/or binding.
Residue |
Function |
Conserved Function |
Asp363 (Trex) |
catalytic nucleophyle |
YES (Asp466) |
Glu399 (Trex) |
catalytic acid/base |
YES (Glu526) |
Asp471 (Trex) |
transition state stabilizer |
YES (Asp597) |
Trp757 (ChlreISA1) |
stacking interactions SBS1 |
YES (Trp740) |
Trp767 (ChlreISA1) |
stacking interactions SBS1 |
YES (Trp750) |
Trp652 (ChlreISA1) |
stacking interactions SBS2 |
YES (Trp629) |
His794 (ChlreISA1) |
stacking interactions SBS2 |
YES (His778) |
Trp856 (ChlreISA1) |
stacking interactions SBS2 |
NO (Arg840) |
Arg667 (ChlreISA1) |
key for dimerization |
NO (Ala648) |
Asp848 (ChlreISA1) |
key for dimerization |
NO (Lys832) |
Ref: Trex: Sulfolobus solfataricus glycogen debranching enzyme; ChlreISA1: Chlamydomonas reinhardtii isoamylase; SBS1: carbohydrate surface binding site 1; SBS2: carbohydrate surface binding site 2.