Table 2: The effect of different treatments on bacterial community in subgingival, supragingival, and furcation defect niches.

Genera that Decreased after Treatment Type of Treatment Genera that Increased after Treatment Type of Treatment
Subgingival Plaque
Porphyromonas
Tannerella 		NSPT* [44-46]
NSPT*+ Antibiotics [41, 44]		 Streptococcus NSPT* [44-46]
NSPT*+ Antibiotics [41, 44]
Sodium hypochlorite mouth rinse [48]
Filifactor Treponema NSPT* [45, 46]
NSPT*+ Antibiotics [41, 44]		 Prevotella
Selenomonas 		NSPT* [44, 45]
NSPT*+ Antibiotics [44]
Sodium hypochlorite mouth rinse [48]
Rothia Selenomonas NSPT* [44]
NSPT*+ Antibiotics [41, 44]		 Actinomyces Capnocytophaga NSPT* (15-17)
NSPT*+ Antibiotics [44]
Kingella NSPT* [41]
NSPT*+ Antibiotics [41]		 Neisseria
Rothia 		NSPT* (15,17)
NSPT*+ Antibiotics [44]
Eubacterium NSPT* [44]
NSPT*+ Antibiotics [44]		 Veillonella NSPT* [45, 46]
NSPT*+ Antibiotics [41]
Capnocytophaga Eikenella
Fretibacterium
Oceanivirga 		NSPT*+ Antibiotics [41] Corynebacterium NSPT* [45, 46]
NSPT*+ Antibiotics [44]
Gemella
Leptotrichia
Neisseria 		NSPT* [45] Campylobacter Fusobacterium NSPT* [45]
Dialister NSPT* [45, 46] Cardiobacterium NSPT* [46]
- - Derxia NSPT*+ Antibiotics [44]
- - Aerococcus
Dialister
Slackia 		Sodium hypochlorite mouth rinse [48]
Supragingival plaque
Fusobacterium Kingella
Neisseria
Porphyromonas 		NSPT* [47] Actinomyces
Corynebacterium
Rothia 		NSPT* [47]
Capnocytophaga NSPT* [47]
Probiotic tablets [43]		 - -
Camylobacter Enterobacter
Leptotrichia
Prevotella 		Probiotic tablets [43] Bifidobacterium
Clostridium
Streptococcus 		Probiotic tablets [43]
In Furcation defects (Subgingival)
Filifactor Fusobacterium
Streptococcus
Veillonella 		EMD* + Bone [42] Camylobacter
Parvimonas
Pseudomonas
Selenomonas 		EMD* + Bone [42]
Actinomyces EMD* [42] - -

*EMD, Enamel Matrix Derivatives; NSPT, Non-Surgical Periodontal Treatment.