| Mycobacterium Species | No. of strains identified (%) | Sample sequence code (and %identity) |
|---|---|---|
| M. avium-intracellulare complex (MAC) | 40 (49.4%) | B3 (100%), B5 (100%), B7 (100%), B8 (100%), B19 (100%), B21 (100%), B22 (100%), B25 (100%), B26 (100%), B27 (100%), B28 (100%), B29 (100%), B30 (100%), B32 (100%), B33 (100%), B36 (100%), B37 (100%), B39 (100%), B40 (100%), B41 (100%), B42 (100%), B43 (100%), B44 (100%), B45 (100%), B46 (100%), B48 (100%), B49 (99.7%), B51 (100%), B54 (100%), B56 (100%), B61 (100%), B63 (100%), B65 (100%), B67 (100%), B68 (100%), B70 (100%), B73 (100%), B76 (100%), B81 (100%), B88 (100%) |
| M. lentiflavum | 5 (6.2) | B2 (100%), B4 (100%), B18 (100%), B23 (100%), B58 (100%) |
| M. terrae complex | 4 (4.9) | B13 (100%), B24 (99.9%), B47 (100%), B50 (100%) |
| M. paraense | 4 (4.9) | B9 (100%), B12 (99.7%), B52 (99.9%), B72 (100%) |
| M. kansasii | 3 (3.7) | B11 (99.5%), B20 (99.5%), B55 (99.5%) |
| M. moriokaense | 3 (3.7) | B74 (99.2%), B80 (99.2%), B90 (99.1%) |
| M. asiaticum | 2 (2.5) | B16 (100%), B34 (99.3%) |
| M. novocastrense | 2 (2.5) | B31 (100%), B57 (100%) |
| M. brasiliensis | 2 (2.5) | B38 (99.2%), B75 (100%) |
| M. elephantis | 2 (2.5) | B79 (100%), B86 (100%) |
| M. paraffinicum | 1 (1.2) | B10 (99.9%) |
| M. bohemicum | 1 (1.2) | B14 (99.6) |
| M. manitobense | 1 (1.2) | B15 (99.0%) |
| M. intermedium | 1 (1.2) | B35 (100%) |
| Mtb complex | 1 (1.2) | B62 (100%) |
| M. parakoreense | 1 (1.2) | B66 (99.0%) |
| M. florentinum | 1 (1.2) | B71 (100%) |
| M. litorale | 1 (1.2) | B82 (100%) |
| M. fluoranthenivorans | 1 (1.2) | B83 (100%) * |
| M. sherrisii | 1 (1.2) | B84 (100%) |
| M. fortuitum | 1 (1.2) | B85 (100%) |
| M septicum | 1 (1.2) | B87 (100%) ** |
| Unidentified species | 2 (2.5) | B64 (98.8% M. montefiorense), B69 (98.6% M. phlei) |
| TOTAL | 81 (100) |