Primer code/target gene |
Sequence (5' to 3')* |
Amplicon size |
Reference |
qacA/B (F) |
CTATGGCAATAGGAGATATGGTGT |
321 bp |
(24) |
qacA/B (R) |
CCACTACAGATTCTTCAGCTACATG |
qacC (F) |
AACAATGCAACACCTACCACT |
157 bp |
(24) |
qacC (F) |
AACGAAACTACGCCGACTATG |
smr (F) |
CTATGGCAATAGGAGATATGGTGT |
417 bp |
(25) |
smr (R) |
CCACTACAGATTCTTCAGCTACATG |
norA (F) |
TTCACCAAGCCATCAAAAAG |
95 bp |
(26) |
norA (R) |
CCATAAATCCACCAATCCC |
norB (F) |
AGCGCGTTGTCTATCTTTCC |
213 bp |
(27) |
norB (R) |
GCAGGTGGTCTTGCTGATAA |
norC (F) |
AATGGGTTCTAAGCGACCAA |
216 bp |
(27) |
norC (R) |
ATACCTGAAGCAACGCCAAC |
mepA (F) |
TGCTGCTGCTCTGTTCTTTA |
198 bp |
(27) |
mepA (R) |
GCGAAGTTTCCATAATGTGC |
mdeA (F) |
GTTTATGCGATTCGAATGGTTGGT |
155 bp |
(28) |
mdeA (B) |
AATTAATGCAGCTGTTCCGATAGA |
sepA (F) |
GCAGTCGAGCATTTAATGGA |
103 bp |
(27) |
sepA (R) |
ACGTTGTTGCAACTGTGTAAGA |
lmrS (F) |
TGCAGTTAAATGCGATGGCG |
135 bp |
This study |
lmrS (R) |
GAAATCTCACATGGCACGGC |
sdrM (F) |
GGCAATGATCGCAATCGGTA |
126 bp |
This study |
sdrM (R) |
ATGGGCATAGTTGGCAGTGT |
tet38 (F) |
AGTTGGCAAGCGACATTAGC |
212 bp |
This study |
tet38 (R) |
GTCTCTGCAGCAGCTAAACC |
MecA1-F |
GTAGAAATGACTGAACGTCCGATAA |
310 bp |
(8) |
MecA2-R |
CCAATTCCACATTGTTTCGGTCTAA |
314F (Eubacteria 16S rDNA V3 region) |
CCTACGGGAGGCAGCAG |
200 bp |
(29) |
518R (Eubacteria 16S rDNA V3 region) |
ATTACCGCGGCTGCTGG |