| SCCmec Type | Primers and Probes Set |
|---|---|
| SCCmec I | Forward primer: 5-gTTCTCTCATAgTATgACgTCC-3 Reverse primer: 5-gCTTTAAAgAgTgTCgTTATAgg-3 Oligonucleotidehybridization probes: 5-ATAgCTTTTAAATAATTAAAgATAgggCC--FL LC640-AAgCCTTCAATTgTACCTgAATgTT--PH |
| SCCmec II | Forward primer: 5-CgAAATCAATggTTAATggACC-3 Reverse primer: 5-CgTTgAAgATgATgAAgCg-3 Oligonucleotidehybridization probes: 5-gCAATTCAgAgACTTTgTggACACACCTAT--FL LC640-TTgTgATTAgTgCACgAACAgAggAACAA--PH |
| SCCmec III | Forward primer: 5-CCTTAgTTgTCgTAACAgATCg-3 Reverse primer: 5-CCATATTgTgTACgATgCg-3 Oligonucleotidehybridization probes: 5-ACCAACTATACAgTACgTTTgTTAAATCgA--FL LC640-AggACggTCTggTAAAggTTTATTAAgA—PH |
| SSCmec Iva | Forward primer: 5-gCCTTATTCgAAgAAACCg-3 Reverse primer: 5-CTACTCTTCTgAAAAgCgTCg-3 Oligonucleotidehybridization probes: 5-CTgggAATCTATCACTAATCgCATTATACTT—FL LC640-CCAAAgAATAATAAACATgCTgTAgTCATTTT—PH |
| SSCmec IVb | Forward primer: 5-AAACAATATTgCTCTCCCTC -3 Reverse primer: 5-TCTggAATTACTTCAgCTgC-3 Oligonucleotidehybridization probes: 5-ATTgTTCAgTTgACCTCTCTTTAATATTTg--FL LC640-CAATACCgCTAAATCTAgTTTTggATACTC--PH |
| SSCmec IVc | Forward primer: 5-TTggTATgAggTATTgCTgg -3 Reverse primer: 5-ACAATATTTgTATTATCggAgAgC-3 Oligonucleotidehybridization probes: 5-TgTTgAATAATTTTTTCATACgCTTTATCTATT--FL LC640-AATTTTCATCTCTTTCAggTAAATTAgAAACAA--PH |
| SSCmec IVd | Forward primer: 5-TgCTCCAgTAATTgCTAAAg-3 Reverse primer: 5-CTCAAAATACggACCCCAATACA-3 Oligonucleotidehybridization probes: 5-AAAgCTgAAAAgAAAATACTTgAAgAAATAATgACg--FL LC640-ACTCTCAAATTAAAgAgACAgCAAAAgAgTTAgCAg—PH |
| SSCmecV | Forward primer: 5- gAACATTgTTACTTAAATgAgCg-3 Reverse primer: 5-TgAAAgTTgTACCCTTgACACC-3 Oligonucleotidehybridization probes: 5-ATCCTCTTCTAATATTTgATTTgAAAATTTgCA--FL LC640-AAATACCATTCTTTAgTCACATCAATgTCATTTgT--PH |