Isolate number | PVL | SCCmectype |
spa Cluster |
spa sequence types |
agr Group |
PFGE | MLST typing |
Geographic distribution (http://spaserver.ridom.de) |
|||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ST |
Allelic Profile |
CC | |||||||||||
2 | Neg | IVd | D | NA | I | E | NA | 3-3-1-1-4-88-? | ?? | NA | |||
71 | Pos | V | H | 891 | I | A3 | 22 | 7-6-1-5-8-8-6 | 22 | Europe, Indonesia, SA and Canada | |||
100 | Neg | IVd | F | 1257 | I | A6 | 612 | 3-3-1-1-4-88-83 | 8 | SA and Austraila | |||
131 | Neg | II+SCCmecury | A | 037 | III | A | 239 | 2-3-1-1-4-4-3 | 8 | Asia, Austraila, SA, South America and Europe | |||
133 | Neg | Iva | A | 037 | I | A | 239 | 2-3-1-1-4-4-3 | 8 | Asia, Austraila, SA, South America and Europe | |||
134 | Neg | IVd | NT | NA | I | B2 | NT | ?-?-1-1-?-4-83- | NT | NA | |||
143 | Neg | Iva | D | 1257 | III | B | 612 | 3-3-1-1-4-88-83 | 8 | SA and Austraila | |||
165 | Neg | NT | NT | NA | I | I | NT | ?-3-1-1-?-4-3 | NT | NA | |||
183 | Neg | I | S | 012 | I, III | J | 36 | 2-2-2-2-3-3-2 | 30 | USA, UK, Austraila, Canada and SA | |||
Ridom sequence spa types, sequence types and geographical distribution of spa types identified in this study | |||||||||||||
Spa types | Ridom sequence of spa types | Sequence type |
Geographic distribution (http://spaserver.ridom.de) |
||||||||||
t012 | 15-12-16-02-16-02-25-17-24-24 | ST36 | Australia, Belgium, Canada, Cyprus, Denmark, Finland, France, Germany, Iceland, Italy, Jordan, Latvia, Lebanon, Netherlands, New York, Norway, Poland, SA, Spain, Sweden, Switzerland, UK and USA | ||||||||||
t037 | 15-12-16-02-25-17-24 | ST239 | Australia, Belgium, Bulgaria, Canada, China, Croatia, Denmark, France, Germany, Iceland, Italy, Jordan, Latvia, Lebanon, Malaysia, Netherlands, New York, Norway, Poland, South Africa, Spain, Sweden, Switzerland, Taiwan and UK | ||||||||||
t891 | 26-23-13-23-31-05-17-25-17-25-28 | ST22 | Denmark, Finland, Germany, Norway, South Africa, Sweden and Switzerland | ||||||||||
t1257 | 11-19-34-05-17-34-24-34-22-25 | ST612 | Denmark, Germany, Norway and South Africa |