Table 2: Oligonucleotide probes used in this study.
Probe |
Sequence (5’ – 3’) |
Target |
Rank |
Formamide % |
References |
ARC915 |
GTGCTCCCCCGCCAATTCCT |
Most Archaea
|
DOMAIN |
35 |
[23] |
MG1200b |
CRGATAATTCGGGGCATGCTG |
Most Methanomicrobiales
|
ORDER |
20 |
[24] |
MX825 |
TCGCACCGTGGCCGACACCTAGC |
Methanosaetaceae |
FAMILY |
50 |
[23] |
MS1414 |
CTCACCCATACCTCACTCGGG |
Methanosarcinaceae |
FAMILY |
50 |
MS821 |
CGCCATGCCTGACACCTAGCGAGC |
Some Methanosarcina
|
GENUS |
40 |
MC1109 |
GCAACATAGGGCACGGGTCT |
Methanococcales |
ORDER |
45 |
MB1175 |
TACCGTCGTCCACTCCTTCCTC |
Most Methanobacteriales
|
ORDER |
45 |
MB310 |
CTTGTCTCAGGTTCCATCTCCG |
Methanobacteriales |
ORDER |
35 |
MX1361 |
ACGTATTCACCGCGTTCTGT |
Methanosaetaceae |
FAMILY |
25 |
[24] |