Primer Pair | Sequence (5’-3’) | Target Gene | Location Within Gene (5’to 3’ Base Pair Positions) | Size of Amplicon (bp) | Accession Number | Reference |
---|---|---|---|---|---|---|
AH-aerAF AH-aerAR |
CAAGAACAAGTTCAAGTGGCCA ACGAAGGTGTGGTTCCAGT |
A. hydrophila aerA | 1323–1344 1631–1613 |
309 | M16495 | 22 |
A16SF A16SR |
GGGAGTGCCTTCGGGAATCAGA TCACCGCAACATTCTGATTTG |
16S rRNA | 1020–1041 1375–1355 |
356 | X74677 | 22 |
AHCF AHCR |
GAGAAGGTGACCACCAAGAACA AACTGACATCGGCCTTGAACTC |
act | 1661–1682 1892–1871 |
232 | M84709 | 17 |
AHLF AHLR |
TGCTGGGCCTGCGTCTGGCGG AGGAACTCGTTGACGAAGCAGG |
alt | 686–707 1046–1025 |
361 | L77573 | 21 |
AHSF AHSR |
GACTTCAATCGCTTCCTCAACG GCATCGAAGTCACTGGTGAAGC |
ast | 2579–2600 3114-3093 |
536 | AF419157 | 21 |
gyrB-F gyrB-R |
GAAGGCCAAGTCGGCCGCCAG ATCTTGGCATCGCCCGGGTTTTC |
gyrB | 912-932 1109-1086 |
198 | F074917 and AF208250–AF208260 | 13 |