Type of Retrotransposon: Order and Superfamily for LTR- Retrotransposon | EST Acc. n° | Total Lenght - [Lenght of the Microsatelitte Region]- (Lenght of the poly(A) Tail) |
Data Concerning the Closer Homologous Complete Retrotransposon: Name of the Element (if Known), Taxon, Species, Acc. n° | Protein Domain Matching | Other Caracteristic(s) of the ESTs |
---|---|---|---|---|---|
LTR-retrotransposon: Retrovirus-like, Gypsy | CR953949 | 641-(0) | Tv1, insect Drosophila virilis (AF056940) | RT-RNase H | One frameshift |
LTR-retrotransposon: Retrovirus-like, Gypsy | CR953634 CR953418 CR953554 |
494-(23) 494-(23) 494-(23) |
Tv1, insect Drosophila virilis (AF056940) | RT | The three sequences are stricly identical |
LTR-retrotransposon: Retrovirus-like, Gypsy | CR952896 | 360-(0) | Tv1, insect Drosophila virilis (AF056940) | RT | |
LTR-retrotransposon: Bel-Pao | CR950076 CR950075 |
784–(0) 682-(0) |
Kamikaze, insect Bombyx mori [30] | RT | Shortest sequence internal to the longest |
Penelope-like element (Ple) | CR950254 | [53]-471-(26) | Xena, fish Takifugu rubripes (AAK58879) | RT | (CAA)n microsatellite |
Penelope-like element (Ple) | CR950255 | 706-[303]-(0) | Xena, fish Takifugu rubripes (AAK58879) | RT | (CAA)n microsatellite |
Penelope-like element (Ple) | CR941783 | 714-(30) | Xena, fish Takifugu rubripes (AAK58879) | RT | Complementary sequence |
LINE | CR950197 | 574-(0) | CR1, testudine, Platemys spixii (AB005891) | RT | |
LINE | CR950101 | 669-(0) | CR1-1, fish, Danio rerio (AB211149) | RT | |
Putative integrase of an unknown element | CR950196 | 678-(30) | Urochordate Oikopleura dioica (AAS21408) | IN | Doubtful, homology with only one putative integrase |