Straina
|
Sequenceb
|
M14707 |
TGATTAGATTGAATGATGAGAAATGGACAGAAATGAAGGATGACA |
M59808 |
TGATTAGATTGAATGATGAGAAATGGACAGAAATGAAGGATGACA |
M59809 |
TGATTAGATTGAATGATGAGAAATGGACAGAAATGAAGGATGACA |
M59810 |
TGATTAGATTGAATGATGAGAAATGGACAGAAATGAAGGATGACA |
M16632 |
TGATTAGATTGAATGATGAGAAATGGACAGAAATGAAGGATGACA |
X75214 |
TGGTCAGATTGAATGATGAGAAATGGACAGAAATGAAAGATGATA |
X75215 |
TGGTCAGATTGAATGATGAGAAATGGACAGAAATGAAAGATGATA |
X83302 |
TGGTCAGATTGAATGATGAGAAATGGACAGAAATGAAAGATGATA |
K02990 |
TGATCAGATTGAATGATGAGAAATGGACAGAAATGAAGGATGATA |
AB020564 |
TGGTCAGATTGAATGATGAGAAATGGACAGAAATGAAAGATGATA |
AB020565 |
TGGTTAGATTGAATGATGAGAAATGGACAGAAATGAAGGATGACA |
AB020566 |
TGGTCAGATTGAATGATGAGAAATGGACAGAAATGAAGGATGACA |
AB020567 |
TGAGTAGATTGAATGATGAGAAATGGACAGAAATGAAGGATGATA |
AB020568 |
TGGTTAGATTGAATGATGAGAAATGGACAGAAATGAAAGATGATA |
AB020569 |
TGATTAGATTGAATGATGAGAAATGGACAGAAATGAAGGATGATA |
forward primer |
GAATGATGAGAAATGGACAGAAATG |
a Strains are identified by their GenBank accession number.
b HAV sequence alignment is presented as the positive (sense) genomic strand in 5’ to 3’ orientation. The primer sequence and nucleotide identity is based on the genomic sequence and nucleotide numbering of HM175 strain 18f (M59808) at nucleotide positions 3399 to 3423.